CDS

Accession Number TCMCG006C36653
gbkey CDS
Protein Id XP_013748905.1
Location complement(join(27863253..27863933,27864155..27864981,27865064..27865191,27865429..27865733))
Gene LOC106451520
GeneID 106451520
Organism Brassica napus

Protein

Length 646aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013893451.2
Definition phosphomethylpyrimidine synthase, chloroplastic [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category H
Description Radical SAM ThiC family
KEGG_TC -
KEGG_Module M00127        [VIEW IN KEGG]
KEGG_Reaction R03472        [VIEW IN KEGG]
KEGG_rclass RC03251        [VIEW IN KEGG]
RC03252        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K03147        [VIEW IN KEGG]
EC 4.1.99.17        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00730        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
map00730        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006766        [VIEW IN EMBL-EBI]
GO:0006767        [VIEW IN EMBL-EBI]
GO:0006772        [VIEW IN EMBL-EBI]
GO:0006790        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007584        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009110        [VIEW IN EMBL-EBI]
GO:0009228        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010243        [VIEW IN EMBL-EBI]
GO:0010266        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019144        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019904        [VIEW IN EMBL-EBI]
GO:0031667        [VIEW IN EMBL-EBI]
GO:0033273        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042364        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0042723        [VIEW IN EMBL-EBI]
GO:0042724        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044272        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048037        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051536        [VIEW IN EMBL-EBI]
GO:0051540        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072527        [VIEW IN EMBL-EBI]
GO:0072528        [VIEW IN EMBL-EBI]
GO:0080041        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTCCGTACACAGTAGTACTTTGATGTCTGTCGTATGCAACAACAACAACAAGAACCACTCCGCCTGGCCCAAACTTCCAAACTCTTCCTTACTACCTGGATTCGATGTTGTTGTCCAAGCTGCTGCCGTTCGGTTCAAGAAAGACACAACAACCACAAGAGCCACGTTGACGTTTGATCCACCAACCACTAACTCAGAGAGAGCCAAGCAGAGAAAACACACCATCGACCCTTCTTCTCCTGATTTTCAGCCAATCCCATCGTTCGAGGAATGCTTCCCTAAGAGCACTAAAGAACACATTGAGGTTGTTCATGAGGTATCTGGTCATGTTCTCAAAGTTCCTTTCAGACGTGTGCATCTGTCTGGTGGTGAGCCAGCTTTTGATAACTACGACACTAGTGGTCCTCAAAATGTTAACCCACACGCTGGGCTTGCTAAGCTAAGGAAGGAGTGGATTGATCGTCGTGAGAAGCTAGGAACACCAAGGTTCACCCAAATGTACTACGCAAAGCAAGGAATCATAACCGAGGAGATGCTCTACTGCGCTACCAGGGAGAAGCTCGACCCTGAGTTTGTGAGATCAGAAGTTGCTCGTGGGAGAGCCATTATCCCTTCCAACAAGAAGCATTTGGAGCTTGAACCGATGATTGTCGGTAGAAAGTTCTTGGTCAAGGTCAATGCCAATATCGGAAACTCAGCCGTTGCGAGCTCCATAGAAGAAGAAGTCTACAAGGTTCAGTGGGCGACCATGTGGGGAGCTGACACGATCATGGACCTCTCAACTGGTCGTCACATCCACGAGACACGCGAGTGGATCCTAAGGAACTCAGCTGTTCCTGTCGGCACCGTCCCCATTTACCAGGCCCTTGAGAAAGTGGATGGTATTGCTGAGAATCTTACCTGGGAAGTGTTCAGAGAGACTCTCATTGAACAAGCCGAGCAAGGTGTGGATTACTTCACTATCCACGCTGGTGTTCTGCTGCGTTACATTCCTTTAACGGCTAAGCGTATGACTGGCATCGTTTCTCGTGGAGGATCCATCCATGCTAAGTGGTGCTTGGCTTACCACAAGGAGAACTTTGCCTATGAGCACTGGGATGATATTCTAGACATCTGTAACCAGTATGATGTGGCTCTTTCGATAGGTGATGGTCTTAGACCTGGATCCATCTATGATGCTAATGACACTGCCCAGTTTGCTGAGCTTCTTACTCAAGGTGAACTAACTCGCCGAGCATGGGAGAAAGATGTGCAGGTGATGAATGAAGGGCCAGGGCATGTGCCAATGAACAAGATTCCAGAGAATATGCAGAAGCAGCTTGAATGGTGTAACGAGGCACCATTCTACACGCTTGGTCCATTGACTACTGATATAGCTCCTGGATATGATCACATCACCTCTGCCATTGGAGCTGCCAATATTGGAGCCTTGGGCACAGCTCTTCTTTGCTATGTAACACCTAAAGAGCATCTCGGGTTACCAAACAGAGACGATGTGAAGGCTGGGGTTATAGCTTACAAGATAGCCGCACATGCAGCTGATCTAGCCAAGCAGCATCCACATGCACAGGCGTGGGACGATGCGCTGAGCAAGGCGCGGTTTGAGTTTAGGTGGATGGATCAGTTTGCTCTGTCCTTGGACCCTATGACCGCTATGTCCTTCCATGATGAGACACTTCCGGCTGATGGAGCCAAGGTTGCACACTTCTGCTCCATGTGTGGACCAAAATTCTGCTCCATGAAGATAACTGAAGACATCAGGAAGTATGCAGAGGAGAATGGTTATGGCACTGCTGAGGAAGCTCTCAGAAAAGGGATGGAGGCTATGAGTCAAGAGTTCAATGTTGCAAAGAAAACCATCAGCGGAGAGCAGCACGGTGAAGTTGGTGGTGAAATCTACTTGCCAGAGAGCTATGTCAAGGCTAATCAGAAGTAA
Protein:  
MSSVHSSTLMSVVCNNNNKNHSAWPKLPNSSLLPGFDVVVQAAAVRFKKDTTTTRATLTFDPPTTNSERAKQRKHTIDPSSPDFQPIPSFEECFPKSTKEHIEVVHEVSGHVLKVPFRRVHLSGGEPAFDNYDTSGPQNVNPHAGLAKLRKEWIDRREKLGTPRFTQMYYAKQGIITEEMLYCATREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRKFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLTWEVFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKDVQVMNEGPGHVPMNKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKQHPHAQAWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPADGAKVAHFCSMCGPKFCSMKITEDIRKYAEENGYGTAEEALRKGMEAMSQEFNVAKKTISGEQHGEVGGEIYLPESYVKANQK